CDS

Accession Number TCMCG017C11647
gbkey CDS
Protein Id OMO99176.1
Location complement(join(2580..2678,2939..3025,3123..3209,3621..3706,3788..3891,4196..4282,4370..4493,4889..5007,5160..5289,5462..5550,5639..5727,6394..6487,6586..6665,6783..6872,7231..7317,7423..7467,7587..7663,7739..7844,7989..8070,8174..8245,8347..8424,8522..8582,8799..8925))
GeneID InterPro:IPR000873
Organism Corchorus olitorius
locus_tag COLO4_13462

Protein

Length 699aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015177.1
Definition AMP-dependent synthetase/ligase [Corchorus olitorius]
Locus_tag COLO4_13462

EGGNOG-MAPPER Annotation

COG_category I
Description Long chain acyl-CoA synthetase
KEGG_TC 4.C.1.1
KEGG_Module M00086        [VIEW IN KEGG]
KEGG_Reaction R01280        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00014        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K01897        [VIEW IN KEGG]
EC 6.2.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00061        [VIEW IN KEGG]
ko00071        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
ko03320        [VIEW IN KEGG]
ko04146        [VIEW IN KEGG]
ko04216        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04920        [VIEW IN KEGG]
map00061        [VIEW IN KEGG]
map00071        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03320        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
map04216        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04920        [VIEW IN KEGG]
GOs GO:0000302        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001676        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004467        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005777        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010193        [VIEW IN EMBL-EBI]
GO:0015645        [VIEW IN EMBL-EBI]
GO:0016405        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016877        [VIEW IN EMBL-EBI]
GO:0016878        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042579        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAATGGAATCGTCAGCTCAACGCCGTCTCCAAGCCATCAACTCTCATCTTCTATCTTCCCCCGCCGCCGAGGATGACTCCGTTCTCCGCCGTAACTTCACGTCCTCGTCACATTTCTTTCACGGTGAAAAATACGGTGTAGTTCTTCCAGAGAAATTGCAAAGTGGAAAATGGAATGTTTACAGATCGATTCGTTCTCCGATGAAGTTTGTGAGTAGGTTTGCTGATCATCCCGAAATTGGGACATTGCACGATAATTTTGTACATGCTGTTGAGACTTACAGAGATTACAAGTACTTGGGAACAAGAAATCGGGTGGATGGAACAGTTGGGGACTATAAGTGGATGACATATGGAGAAGTAGCTACAGCTCGGGAGGCAATAGGTTCTGGCCTTAGGTTTTATGGGGTAGAACTAGGAGCTCGTGTTGGACTCTATTTTATTAATCGACCTGAGTGGATGGTGGTTGATCATGCTTGTGCTGCATATTCATATATTTCTGTTCCTTTATATGATACTTTAGGTCCTGATGCAGTTACGTATGTTGTCAATCATTCTGGCATAAAGGCCATTTTTTGTGTCCCACAAACTTTGAACACTCTGTTGAGCTTCATATCTCAGATTCCATCTGTGCGTCTTATAGTGGTTGTGGGTGGAGCTGATGAACACTTACCTTCACTTCCCGCAACATCTGGTGTGAAGCTCATATCATATTTAAAATTACTTGGTCAGGGCCGCAGTAACCTGCAACCATTTTGCCCTCCAAAGCCTGAGGATGTTGCGACAATATGCTACACTAGTGGTACCACTGGAACACCAAAGGGGGTTGTCTTAACACATGGAAATTTAATTGCAAATGTTGCTGGTTTCTGCCTAGCTTTCAAATTCTATCCCTCGGACATTTATATATCCTATCTTCCTTTGGCTCACATCTATGAACGAACAAACCAAATCATCTCGGTTTATAATGGCGTTGGGGTTGGCTTCTATCAGGGGGACAATTTGAAACTGATGGATGATTTGGCTGCTCTTAGACCTACAATATTTTGCAGTGTGCCTAGATTATATAATCGAATTTATGCTGGAATCACCAATGCTGTAAAAAGTTCTGGCGTTCTAAAGGAGAGGCTATTTAGAGCTGCCTACAATTCCAAGAAGAGCGCCATTATGAATGGAAGGAAAGCTTCACCAATTTGGGACAAATTGGTCTTCAATAAAATAAGGGAAAAGCTTGGAGGACGAGTACGTTTTATGGGATCCGGTGCTTCCCCCCTGTCTCCTGATGTAATGGACTTCCTGAGAGTGTGTTTTGGCTGTCTAGTACTTGAGGGATATGGCATGACTGAGACTTCTTGTATCATAACCTTGATGGATGAAGGGGACAACTTAACTGGTCACGTTGGGTCTCCAAATGCTGCCTGTGAAATAAAACTTGTGGATGTTCCTGAAATGAACTACACCTCTGAGGATGAGCCATATCCTCGTGGGGAAATTTGTGTGAGAGGTCCTATTGTTTTCCAAGGCTACTACAAGGATGAAGTCCAGACGAGAGAAGTAGTCGATGATGATGGTTGGCTGCATACAGGAGACATTGGTTTGTGGTTACCTGGGGGGCGTCTCAAGATAATTGATAGGAAAAAGAACATATTTAAGTTGGCGCAGGGTGAGTACATAGCACCTGAGAAGATTGAGAATGTATATGCAAAATGCAAATTTATTGCACAGTGTTTTATATACGGTGATAGTTTGAATTCATCTTTAGTAGCAGTAGTTGCGGTGGACCCTGATGTATTGAGAGATTGGGCTGCATCTGAGGGTATCCAGTATGAGGATTTACGACAACTATGCAATGATCCAAGAGTAAGGAATGCTGTTCTTGCCGAGATGGATAATGTTGGAAGGGAAGCCCAGTTAAGAGGTTTTGAATTTGCAAAGGCTGTAACTTTGGTGCCGGAACCATTCACTGAAGAGAATGGCCTTCTCACACCAACATTTAAGATCAAGCGGCCTCAAGCAAAGGCGTACTTCGCAAAGGCGATATCAAACATGTATGCTGAGCTTTCAACATCGGATCCAACACCACAGAAAATGTCATGA
Protein:  
MEMESSAQRRLQAINSHLLSSPAAEDDSVLRRNFTSSSHFFHGEKYGVVLPEKLQSGKWNVYRSIRSPMKFVSRFADHPEIGTLHDNFVHAVETYRDYKYLGTRNRVDGTVGDYKWMTYGEVATAREAIGSGLRFYGVELGARVGLYFINRPEWMVVDHACAAYSYISVPLYDTLGPDAVTYVVNHSGIKAIFCVPQTLNTLLSFISQIPSVRLIVVVGGADEHLPSLPATSGVKLISYLKLLGQGRSNLQPFCPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGFCLAFKFYPSDIYISYLPLAHIYERTNQIISVYNGVGVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYAGITNAVKSSGVLKERLFRAAYNSKKSAIMNGRKASPIWDKLVFNKIREKLGGRVRFMGSGASPLSPDVMDFLRVCFGCLVLEGYGMTETSCIITLMDEGDNLTGHVGSPNAACEIKLVDVPEMNYTSEDEPYPRGEICVRGPIVFQGYYKDEVQTREVVDDDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSSLVAVVAVDPDVLRDWAASEGIQYEDLRQLCNDPRVRNAVLAEMDNVGREAQLRGFEFAKAVTLVPEPFTEENGLLTPTFKIKRPQAKAYFAKAISNMYAELSTSDPTPQKMS